Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_10070 | Not Available | + | 5927247 - 5927723 | 18515.3 |
| elongation factor ts | N824_10075 | Not Available | - | 5927797 - 5928636 | 30041.8 |
| 30s ribosomal protein s2 | N824_10080 | Not Available | - | 5928737 - 5929567 | 30651.1 |
| 30s ribosomal protein s9 | N824_10085 | Not Available | - | 5929586 - 5929972 | 14251.5 |
| 50s ribosomal protein l13 | N824_10090 | Not Available | - | 5929984 - 5930427 | 16350.0 |
| hypothetical protein | N824_10095 | Not Available | - | 5930666 - 5931436 | 27335.6 |
| hypothetical protein | N824_10100 | Not Available | - | 5931459 - 5931875 | 16224.5 |
| sodium/glucose cotransporter 2 | N824_10105 | Not Available | - | 5931877 - 5933520 | 60017.8 |
| mandelate racemase | N824_10110 | Not Available | - | 5933541 - 5934770 | 45729.0 |
| hypothetical protein | N824_10115 | Not Available | + | 5934922 - 5935467 | 21518.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.