Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_10015 | Not Available | + | 5916272 - 5916793 | 18644.4 |
| nicotinamide mononucleotide transporter | N824_10020 | Not Available | + | 5916867 - 5917481 | 23939.5 |
| nadr | N824_10025 | Not Available | + | 5917465 - 5917992 | 20107.1 |
| tonb-dependent receptor | N824_10030 | Not Available | + | 5918212 - 5920674 | 92222.1 |
| thiamine-phosphate pyrophosphorylase | N824_10035 | Not Available | + | 5920679 - 5921311 | 23088.5 |
| mfs transporter | N824_10040 | Not Available | + | 5921378 - 5922655 | 46839.6 |
| abc transporter atp-binding protein | N824_10045 | Not Available | - | 5922661 - 5924412 | 65472.9 |
| ribosome recycling factor | N824_10050 | Not Available | - | 5924496 - 5925059 | 20911.5 |
| uridylate kinase | N824_10055 | Not Available | - | 5925100 - 5925807 | 25780.6 |
| hypothetical protein | N824_10060 | Not Available | - | 5925831 - 5926952 | 40744.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.