Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_09865 | Not Available | + | 5887226 - 5888245 | 39123.1 |
| hypothetical protein | N824_09870 | Not Available | + | 5888301 - 5889152 | 33382.7 |
| hypothetical protein | N824_09875 | Not Available | + | 5889187 - 5890143 | 37281.7 |
| hypothetical protein | N824_09880 | Not Available | + | 5890188 - 5890829 | 24808.9 |
| hypothetical protein | N824_09885 | Not Available | - | 5890909 - 5892681 | 64195.4 |
| hypothetical protein | N824_09890 | Not Available | - | 5892774 - 5893256 | 16561.8 |
| hypothetical protein | N824_09895 | Not Available | - | 5893261 - 5893974 | 25548.7 |
| transcription elongation factor nusa | N824_09900 | Not Available | - | 5894058 - 5895293 | 46798.8 |
| hypothetical protein | N824_09905 | Not Available | - | 5895296 - 5895760 | 17203.8 |
| hypothetical protein | N824_09910 | Not Available | - | 5896027 - 5896434 | 14882.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.