Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_09815 | Not Available | - | 5878400 - 5879284 | 32177.4 |
| hypothetical protein | N824_09820 | Not Available | + | 5879366 - 5880025 | 26129.6 |
| hypothetical protein | N824_09825 | Not Available | + | 5880125 - 5880934 | 30950.9 |
| hypothetical protein | N824_09830 | Not Available | + | 5880937 - 5881731 | 30336.6 |
| hypothetical protein | N824_09835 | Not Available | - | 5881718 - 5882821 | 41770.3 |
| hypothetical protein | N824_09840 | Not Available | + | 5882876 - 5882989 | 4046.94 |
| abc transporter atp-binding protein | N824_09845 | Not Available | + | 5883111 - 5884769 | 59793.9 |
| hypothetical protein | N824_09850 | Not Available | + | 5884769 - 5884939 | 6337.7 |
| hypothetical protein | N824_09855 | Not Available | + | 5884965 - 5885930 | 36484.8 |
| hypothetical protein | N824_09860 | Not Available | + | 5885923 - 5887155 | 45433.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.