Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_09765 | Not Available | - | 5868699 - 5868791 | 3461.0 |
| s1/p1 nuclease | N824_09770 | Not Available | - | 5868775 - 5869575 | 30591.8 |
| hypothetical protein | N824_09775 | Not Available | - | 5869607 - 5870041 | 16462.6 |
| fumarate hydratase | N824_09780 | Not Available | - | 5870123 - 5871520 | 50083.3 |
| beta-lactamase | N824_09785 | Not Available | + | 5871711 - 5872940 | 46674.9 |
| atp-dependent dna helicase recg | N824_09790 | Not Available | - | 5872937 - 5875042 | 80500.3 |
| permease | N824_09795 | Not Available | - | 5875047 - 5875958 | 34681.6 |
| endoribonuclease l-psp | N824_09800 | Not Available | - | 5875962 - 5876342 | 13699.5 |
| hypothetical protein | N824_09805 | Not Available | - | 5876339 - 5876479 | 5485.05 |
| flagellar motor protein motb | N824_09810 | Not Available | - | 5876695 - 5878089 | 49908.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.