Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_09715 | Not Available | - | 5855752 - 5856009 | 9395.72 |
| protease | N824_09720 | Not Available | + | 5856032 - 5856964 | 34674.9 |
| peptidase s41 | N824_09725 | Not Available | - | 5857233 - 5859422 | 81521.4 |
| hypothetical protein | N824_09730 | Not Available | - | 5859585 - 5860289 | 26017.0 |
| phospholipase c | N824_09735 | Not Available | - | 5860342 - 5862873 | 95039.9 |
| asparaginase | N824_09740 | Not Available | - | 5863014 - 5863856 | 30047.4 |
| cyanophycinase | N824_09745 | Not Available | - | 5863858 - 5864733 | 31256.7 |
| cyanophycin synthetase | N824_09750 | Not Available | + | 5865094 - 5867709 | 96520.3 |
| hypothetical protein | N824_09755 | Not Available | - | 5867761 - 5868324 | 21360.6 |
| hypothetical protein | N824_09760 | Not Available | - | 5868329 - 5868715 | 14893.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.