Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter | N824_09665 | Not Available | + | 5847218 - 5848519 | 50152.2 |
| response regulator | N824_09670 | Not Available | + | 5848736 - 5849131 | 14618.8 |
| hypothetical protein | N824_09675 | Not Available | + | 5849152 - 5849628 | 18123.7 |
| histidyl-trna synthase | N824_09680 | Not Available | - | 5849621 - 5851009 | 51457.2 |
| hypothetical protein | N824_09685 | Not Available | + | 5851008 - 5851109 | 3807.65 |
| pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase | N824_09690 | Not Available | - | 5851106 - 5852755 | 58370.0 |
| hypothetical protein | N824_09695 | Not Available | - | 5852785 - 5853408 | 23042.2 |
| hypothetical protein | N824_09700 | Not Available | - | 5853383 - 5853781 | 13759.7 |
| glycoside hydrolase | N824_09705 | Not Available | + | 5854046 - 5854570 | 19448.1 |
| hypothetical protein | N824_09710 | Not Available | + | 5854640 - 5855755 | 40688.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.