Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_09615 | Not Available | + | 5837089 - 5838102 | 38025.4 |
| phenylalanyl-trna synthetase subunit alpha | N824_09620 | Not Available | + | 5838106 - 5838885 | 29951.8 |
| alpha/beta hydrolase | N824_09625 | Not Available | - | 5838880 - 5839869 | 37234.1 |
| hypothetical protein | N824_09630 | Not Available | + | 5839958 - 5841448 | 54477.6 |
| hypothetical protein | N824_09635 | Not Available | - | 5841515 - 5842687 | 43947.9 |
| hypothetical protein | N824_09640 | Not Available | - | 5842918 - 5843838 | 32029.5 |
| hypothetical protein | N824_09645 | Not Available | - | 5843961 - 5844248 | 10691.8 |
| hypothetical protein | N824_09650 | Not Available | + | 5844792 - 5845541 | 26975.5 |
| hypothetical protein | N824_09655 | Not Available | + | 5845538 - 5846446 | 32970.3 |
| hypothetical protein | N824_09660 | Not Available | + | 5846558 - 5847211 | 25745.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.