Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_09565 | Not Available | + | 5826961 - 5828856 | 69454.2 |
| hypothetical protein | N824_09570 | Not Available | + | 5828843 - 5829577 | 26329.1 |
| hypothetical protein | N824_09575 | Not Available | + | 5829668 - 5830504 | 31010.3 |
| hypothetical protein | N824_09580 | Not Available | + | 5830504 - 5830890 | 13812.8 |
| rna helicase | N824_09585 | Not Available | + | 5830946 - 5832178 | 45919.8 |
| atpase aaa | N824_09590 | Not Available | + | 5832225 - 5833505 | 47110.8 |
| hypothetical protein | N824_09595 | Not Available | + | 5833507 - 5834979 | 54697.4 |
| atp-binding protein | N824_09600 | Not Available | + | 5834982 - 5835680 | 26465.9 |
| hypothetical protein | N824_09605 | Not Available | + | 5836082 - 5836531 | 15976.9 |
| hypothetical protein | N824_09610 | Not Available | - | 5836610 - 5836954 | 13303.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.