Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | N824_09515 | Not Available | - | 5817875 - 5819716 | 69804.2 |
| hypothetical protein | N824_09520 | Not Available | - | 5820073 - 5820438 | 13552.8 |
| rna methyltransferase | N824_09525 | Not Available | + | 5820511 - 5821698 | 44531.7 |
| hypothetical protein | N824_09530 | Not Available | + | 5821676 - 5822350 | 25448.4 |
| histidine kinase | N824_09535 | Not Available | + | 5822413 - 5823441 | 39328.8 |
| hypothetical protein | N824_09540 | Not Available | + | 5823526 - 5824167 | 24004.8 |
| inorganic phosphate transporter | N824_09545 | Not Available | + | 5824179 - 5825189 | 35520.1 |
| hypothetical protein | N824_09550 | Not Available | - | 5825186 - 5825536 | 13251.6 |
| hypothetical protein | N824_09555 | Not Available | - | 5825614 - 5826291 | 23700.4 |
| rna polymerase sigma70 factor | N824_09560 | Not Available | - | 5826284 - 5826862 | 22498.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.