Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_09415 | Not Available | - | 5794152 - 5794751 | 22943.8 |
| tonb-denpendent receptor | N824_09420 | Not Available | + | 5794848 - 5797337 | 92013.0 |
| dna mismatch repair protein mutt | N824_09425 | Not Available | + | 5797358 - 5797912 | 20493.6 |
| glycerol acyltransferase | N824_09430 | Not Available | + | 5797953 - 5798699 | 28402.8 |
| chemotaxis protein chey | N824_09435 | Not Available | - | 5798713 - 5799462 | 28459.7 |
| membrane protein | N824_09440 | Not Available | - | 5799459 - 5800490 | 39506.6 |
| hypothetical protein | N824_09445 | Not Available | - | 5800704 - 5800910 | 7673.47 |
| hypothetical protein | N824_09450 | Not Available | - | 5801005 - 5802363 | 50282.1 |
| transcriptional regulator | N824_09455 | Not Available | + | 5802533 - 5802910 | 14802.0 |
| hypothetical protein | N824_09460 | Not Available | + | 5802907 - 5804907 | 75431.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.