Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| serine dehydratase | N824_09315 | Not Available | + | 5776267 - 5777694 | 51148.4 |
| hypothetical protein | N824_09320 | Not Available | - | 5777702 - 5779048 | 51978.1 |
| magnesium chelatase | N824_09325 | Not Available | - | 5779060 - 5780037 | 36336.2 |
| hypothetical protein | N824_09330 | Not Available | - | 5780041 - 5781222 | 45690.0 |
| hypothetical protein | N824_09335 | Not Available | - | 5781219 - 5781941 | 28087.1 |
| hypothetical protein | N824_09340 | Not Available | - | 5781943 - 5782833 | 33655.7 |
| membrane protein | N824_09345 | Not Available | - | 5782826 - 5783785 | 36277.6 |
| hypothetical protein | N824_09350 | Not Available | + | 5783917 - 5784648 | 27074.1 |
| hypothetical protein | N824_09355 | Not Available | - | 5784653 - 5785438 | 28560.4 |
| hypothetical protein | N824_09360 | Not Available | - | 5785498 - 5785839 | 13233.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.