Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_09265 | Not Available | - | 5764705 - 5766507 | 68783.0 |
| hypothetical protein | N824_09270 | Not Available | - | 5766553 - 5768439 | 70575.1 |
| (dimethylallyl)adenosine trna methylthiotransferase | N824_09275 | Not Available | + | 5768506 - 5769954 | 54787.1 |
| atpase aaa | N824_09280 | Not Available | + | 5769971 - 5771206 | 46335.4 |
| hypothetical protein | N824_09285 | Not Available | + | 5771209 - 5771706 | 18278.9 |
| hypothetical protein | N824_09290 | Not Available | + | 5771752 - 5772813 | 39761.4 |
| preprotein translocase subunit secg | N824_09295 | Not Available | + | 5772904 - 5773263 | 11900.7 |
| hypothetical protein | N824_09300 | Not Available | + | 5773490 - 5773783 | 10301.3 |
| molecular chaperone groel | N824_09305 | Not Available | + | 5773860 - 5775500 | 57811.7 |
| magnesium transporter mgtc | N824_09310 | Not Available | + | 5775591 - 5776250 | 24478.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.