Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_09215 | Not Available | + | 5750664 - 5751560 | 31528.6 |
| hypothetical protein | N824_09220 | Not Available | - | 5751641 - 5752564 | 35813.1 |
| hypothetical protein | N824_09225 | Not Available | + | 5752694 - 5753281 | 21884.3 |
| hypothetical protein | N824_09230 | Not Available | + | 5753278 - 5754576 | 48339.8 |
| peptidase s9 | N824_09235 | Not Available | + | 5754686 - 5756773 | 79716.4 |
| hypothetical protein | N824_09240 | Not Available | + | 5756799 - 5757605 | 30595.7 |
| hypothetical protein | N824_09245 | Not Available | + | 5757675 - 5759264 | 61520.1 |
| hypothetical protein | N824_09250 | Not Available | + | 5759524 - 5762289 | 103042.0 |
| hypothetical protein | N824_09255 | Not Available | + | 5762320 - 5763573 | 45304.6 |
| hypothetical protein | N824_09260 | Not Available | + | 5763675 - 5764694 | 38014.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.