Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_09115 | Not Available | - | 5728973 - 5729476 | 16774.7 |
| glucose-6-phosphate isomerase | N824_09120 | Not Available | + | 5729646 - 5731295 | 61506.0 |
| hypothetical protein | N824_09125 | Not Available | - | 5731359 - 5731571 | 8068.18 |
| hypothetical protein | N824_09130 | Not Available | + | 5731570 - 5731896 | 11333.8 |
| hypothetical protein | N824_09135 | Not Available | - | 5732130 - 5733236 | 41232.3 |
| hypothetical protein | N824_09140 | Not Available | - | 5733217 - 5733324 | 4242.01 |
| dna primase | N824_09145 | Not Available | - | 5733578 - 5735551 | 74026.1 |
| g-d-s-l family lipolytic protein | N824_09150 | Not Available | - | 5735598 - 5736263 | 24550.9 |
| hypothetical protein | N824_09155 | Not Available | - | 5736318 - 5737262 | 36388.9 |
| n-acyl-l-amino acid amidohydrolase | N824_09160 | Not Available | - | 5737438 - 5738625 | 43386.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.