Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| quinol:cytochrome c oxidoreductase | N824_09060 | Not Available | - | 5716114 - 5716650 | 20133.4 |
| fe-s-cluster-containing hydrogenase | N824_09065 | Not Available | - | 5716653 - 5718125 | 55779.4 |
| molybdopterin oxidoreductase | N824_09070 | Not Available | - | 5718149 - 5721226 | 112876.0 |
| hypothetical protein | N824_09075 | Not Available | - | 5721274 - 5721747 | 17918.4 |
| hypothetical protein | N824_09085 | Not Available | - | 5721936 - 5722574 | 20913.5 |
| hypothetical protein | N824_09090 | Not Available | + | 5724140 - 5725219 | 40767.2 |
| sam-dependent methyltransferase | N824_09095 | Not Available | - | 5725216 - 5726016 | 30535.8 |
| hypothetical protein | N824_09100 | Not Available | + | 5726034 - 5726903 | 33694.1 |
| hypothetical protein | N824_09105 | Not Available | - | 5726905 - 5727819 | 33273.1 |
| hypothetical protein | N824_09110 | Not Available | - | 5727822 - 5728718 | 34199.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.