Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_09010 | Not Available | - | 5706619 - 5707326 | 26141.5 |
| caa(3)-type oxidase | N824_09015 | Not Available | - | 5707326 - 5707685 | 13499.0 |
| cytochrome oxidase subunit iii | N824_09020 | Not Available | - | 5707706 - 5708323 | 23440.9 |
| cytochrome c oxidase subunit iii | N824_09025 | Not Available | - | 5708445 - 5709035 | 22075.4 |
| polyprenyltransferase | N824_09030 | Not Available | - | 5709042 - 5709920 | 32462.7 |
| cytochrome oxidase assembly protein | N824_09035 | Not Available | - | 5709932 - 5710996 | 39891.8 |
| cytochrome c oxidase | N824_09040 | Not Available | - | 5711082 - 5712863 | 66488.2 |
| heme transporter ccmd | N824_09045 | Not Available | - | 5712992 - 5714233 | 46179.4 |
| quinol:cytochrome c oxidoreductase | N824_09050 | Not Available | - | 5714302 - 5715516 | 46115.5 |
| hypothetical protein | N824_09055 | Not Available | - | 5715531 - 5716142 | 22473.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.