Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | N824_08960 | Not Available | - | 5696837 - 5698504 | 63943.5 |
| peptidase | N824_08965 | Not Available | - | 5698515 - 5700407 | 72478.0 |
| hypothetical protein | N824_08970 | Not Available | + | 5700723 - 5702531 | 68732.6 |
| hypothetical protein | N824_08975 | Not Available | + | 5702547 - 5702849 | 11601.8 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | N824_08980 | Not Available | + | 5702858 - 5703412 | 20994.7 |
| membrane protein | N824_08985 | Not Available | - | 5703746 - 5704588 | 31353.8 |
| hypothetical protein | N824_08990 | Not Available | - | 5704673 - 5705335 | 25267.3 |
| hypothetical protein | N824_08995 | Not Available | - | 5705332 - 5705559 | 8732.75 |
| hypothetical protein | N824_09000 | Not Available | - | 5705714 - 5705968 | 9293.62 |
| hypothetical protein | N824_09005 | Not Available | - | 5706025 - 5706597 | 21777.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.