Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_08740 | Not Available | - | 5646945 - 5647163 | 8027.9 |
| hypothetical protein | N824_08745 | Not Available | + | 5647269 - 5650046 | 104906.0 |
| peptidase | N824_08750 | Not Available | + | 5650049 - 5652271 | 83059.9 |
| excinuclease abc subunit c | N824_08755 | Not Available | + | 5652296 - 5654092 | 69277.0 |
| gliding motility protein gldn | N824_08760 | Not Available | - | 5654218 - 5655099 | 33315.7 |
| gliding motility protein gldm | N824_08765 | Not Available | - | 5655106 - 5656644 | 55111.7 |
| gliding motility protein | N824_08770 | Not Available | - | 5656691 - 5657503 | 28963.5 |
| hypothetical protein | N824_08775 | Not Available | - | 5657545 - 5658912 | 51093.6 |
| uroporphyrinogen-iii synthase | N824_08780 | Not Available | - | 5659074 - 5659844 | 29393.3 |
| hypothetical protein | N824_08785 | Not Available | - | 5659861 - 5660970 | 41922.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.