Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| crossover junction endodeoxyribonuclease ruvc | N824_08690 | Not Available | + | 5639511 - 5640077 | 20847.7 |
| hypothetical protein | N824_08695 | Not Available | - | 5640067 - 5640930 | 32922.3 |
| hypothetical protein | N824_08700 | Not Available | - | 5641098 - 5641313 | 7723.76 |
| f0f1 atp synthase subunit gamma | N824_08705 | Not Available | - | 5641397 - 5642278 | 32199.8 |
| f0f1 atp synthase subunit alpha | N824_08710 | Not Available | - | 5642305 - 5643879 | 56730.5 |
| atpase | N824_08715 | Not Available | - | 5643943 - 5644491 | 19748.2 |
| f0f1 atp synthase subunit b | N824_08720 | Not Available | - | 5644526 - 5645020 | 18495.6 |
| atp synthase f0 subunit c | N824_08725 | Not Available | - | 5645112 - 5645324 | 6556.37 |
| atp synthase f0 subunit a | N824_08730 | Not Available | - | 5645366 - 5646487 | 41141.1 |
| hypothetical protein | N824_08735 | Not Available | - | 5646505 - 5646843 | 13063.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.