Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_08640 | Not Available | - | 5630003 - 5630665 | 24114.7 |
| gliding motility protein | N824_08645 | Not Available | + | 5630728 - 5631771 | 40632.7 |
| patatin | N824_08650 | Not Available | + | 5631778 - 5632569 | 28604.2 |
| 2-phosphosulfolactate phosphatase | N824_08655 | Not Available | - | 5632553 - 5633281 | 26629.9 |
| glycine cleavage system protein t | N824_08660 | Not Available | - | 5633298 - 5634377 | 39545.2 |
| glycosyltransferase family 4 | N824_08665 | Not Available | - | 5634418 - 5635620 | 46578.1 |
| ribonuclease hii | N824_08670 | Not Available | - | 5635639 - 5636250 | 22797.4 |
| peptide transporter | N824_08675 | Not Available | - | 5636285 - 5637277 | 36217.6 |
| beta-lactamase regulatory protein | N824_08680 | Not Available | - | 5637376 - 5638452 | 40359.1 |
| hypothetical protein | N824_08685 | Not Available | - | 5638490 - 5639491 | 38868.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.