Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_08590 | Not Available | + | 5619437 - 5621587 | 81161.4 |
| molecular chaperone dnak | N824_08595 | Not Available | + | 5621539 - 5622042 | 14048.8 |
| peptidase a8 | N824_08600 | Not Available | + | 5622042 - 5622644 | 22868.2 |
| hypothetical protein | N824_08605 | Not Available | + | 5622731 - 5623435 | 26281.9 |
| seryl-trna synthetase | N824_08610 | Not Available | + | 5623546 - 5623860 | 11554.6 |
| seryl-trna synthetase | N824_08615 | Not Available | - | 5623940 - 5625211 | 47541.6 |
| 16s rrna methyltransferase | N824_08620 | Not Available | + | 5625289 - 5625999 | 26480.9 |
| hypothetical protein | N824_08625 | Not Available | + | 5626048 - 5626704 | 24985.9 |
| apolipoprotein n-acyltransferase | N824_08630 | Not Available | + | 5626704 - 5628323 | 60799.7 |
| nad+ synthetase | N824_08635 | Not Available | - | 5628324 - 5629964 | 60835.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.