Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_08485 | Not Available | - | 5587838 - 5590465 | 97041.5 |
| hypothetical protein | N824_08490 | Not Available | - | 5590601 - 5591161 | 21455.8 |
| universal stress protein | N824_08495 | Not Available | - | 5591203 - 5592027 | 30174.7 |
| hypothetical protein | N824_08505 | Not Available | - | 5592547 - 5593233 | 21531.5 |
| hypothetical protein | N824_08510 | Not Available | - | 5593252 - 5596020 | 99510.0 |
| hypothetical protein | N824_08515 | Not Available | - | 5596100 - 5597056 | 35375.0 |
| hypothetical protein | N824_08520 | Not Available | - | 5597078 - 5597743 | 23746.4 |
| hypothetical protein | N824_08525 | Not Available | - | 5597822 - 5599138 | 48905.5 |
| hypothetical protein | N824_08530 | Not Available | - | 5599163 - 5600485 | 48859.6 |
| hypothetical protein | N824_08535 | Not Available | - | 5601001 - 5602137 | 41845.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.