Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atpase | N824_08435 | Not Available | + | 5579856 - 5580341 | 18408.8 |
| hypothetical protein | N824_08440 | Not Available | + | 5580452 - 5580721 | 10381.2 |
| hypothetical protein | N824_08445 | Not Available | - | 5580747 - 5581481 | 28025.6 |
| hypothetical protein | N824_08450 | Not Available | + | 5581602 - 5582081 | 17615.3 |
| hypothetical protein | N824_08455 | Not Available | - | 5582382 - 5583116 | 28405.9 |
| hypothetical protein | N824_08460 | Not Available | + | 5583460 - 5584047 | 21283.5 |
| hypothetical protein | N824_08465 | Not Available | - | 5584062 - 5584886 | 31414.6 |
| phytanoyl-coa dioxygenase | N824_08470 | Not Available | - | 5585053 - 5585859 | 30266.2 |
| hypothetical protein | N824_08475 | Not Available | - | 5586105 - 5586884 | 28141.3 |
| hypothetical protein | N824_08480 | Not Available | + | 5586928 - 5587782 | 33056.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.