Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_08380 | Not Available | + | 5570243 - 5570953 | 27101.8 |
| hydrolase tatd | N824_08385 | Not Available | + | 5570964 - 5571950 | 36978.8 |
| hypothetical protein | N824_08390 | Not Available | + | 5571992 - 5572849 | 30495.4 |
| 3-dehydroquinate synthase | N824_08395 | Not Available | + | 5572866 - 5574044 | 43549.0 |
| hypothetical protein | N824_08400 | Not Available | + | 5574047 - 5575255 | 45943.6 |
| phosphodiesterase | N824_08405 | Not Available | + | 5575257 - 5576609 | 51209.6 |
| hypothetical protein | N824_08410 | Not Available | + | 5576683 - 5577864 | 40572.6 |
| hypothetical protein | N824_08420 | Not Available | + | 5578059 - 5579048 | 36410.2 |
| hypothetical protein | N824_08425 | Not Available | - | 5579045 - 5579377 | 12096.1 |
| hypothetical protein | N824_08430 | Not Available | + | 5579537 - 5579869 | 12825.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.