Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_08330 | Not Available | - | 5560665 - 5561852 | 44927.5 |
| hypothetical protein | N824_08335 | Not Available | - | 5561927 - 5563027 | 43108.8 |
| hypothetical protein | N824_08340 | Not Available | - | 5563544 - 5563891 | 13365.5 |
| hypothetical protein | N824_08345 | Not Available | + | 5564082 - 5565332 | 46978.1 |
| hypothetical protein | N824_08350 | Not Available | + | 5565375 - 5565833 | 17194.5 |
| hypothetical protein | N824_08355 | Not Available | + | 5565842 - 5566684 | 32669.4 |
| hypothetical protein | N824_08360 | Not Available | + | 5566788 - 5567417 | 23087.9 |
| hypothetical protein | N824_08365 | Not Available | + | 5567427 - 5568845 | 51930.2 |
| hypothetical protein | N824_08370 | Not Available | - | 5568853 - 5569677 | 29853.5 |
| hypothetical protein | N824_08375 | Not Available | + | 5569857 - 5570231 | 14279.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.