Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_08280 | Not Available | - | 5546721 - 5548385 | 62328.7 |
| hypothetical protein | N824_08285 | Not Available | - | 5548406 - 5551807 | 125015.0 |
| hypothetical protein | N824_08290 | Not Available | - | 5552066 - 5553250 | 44218.6 |
| hypothetical protein | N824_08295 | Not Available | - | 5553387 - 5554001 | 23783.1 |
| hypothetical protein | N824_08300 | Not Available | + | 5554152 - 5554346 | 7570.22 |
| hypothetical protein | N824_08305 | Not Available | - | 5555052 - 5555543 | 18478.1 |
| hypothetical protein | N824_08310 | Not Available | - | 5555551 - 5555787 | 8432.19 |
| hypothetical protein | N824_08315 | Not Available | - | 5556095 - 5557285 | 45663.0 |
| hypothetical protein | N824_08320 | Not Available | + | 5557526 - 5558623 | 42779.2 |
| hypothetical protein | N824_08325 | Not Available | + | 5559145 - 5560587 | 54967.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.