Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_08230 | Not Available | + | 5531590 - 5531859 | 10694.3 |
| hypothetical protein | N824_08235 | Not Available | - | 5531869 - 5532912 | 39577.5 |
| hypothetical protein | N824_08240 | Not Available | - | 5532972 - 5534411 | 55462.1 |
| hypothetical protein | N824_08245 | Not Available | + | 5534552 - 5536489 | 75593.1 |
| hypothetical protein | N824_08250 | Not Available | - | 5536619 - 5537623 | 39430.6 |
| hypothetical protein | N824_08255 | Not Available | + | 5538007 - 5539059 | 38732.6 |
| hypothetical protein | N824_08260 | Not Available | - | 5539282 - 5541204 | 74246.4 |
| hypothetical protein | N824_08265 | Not Available | - | 5541391 - 5541657 | 10517.4 |
| hypothetical protein | N824_08270 | Not Available | - | 5541956 - 5544214 | 84246.1 |
| hypothetical protein | N824_08275 | Not Available | - | 5544338 - 5546704 | 87858.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.