Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_08180 | Not Available | + | 5523878 - 5524747 | 34164.2 |
| hypothetical protein | N824_08185 | Not Available | + | 5524843 - 5525442 | 23042.9 |
| hypothetical protein | N824_08190 | Not Available | + | 5525504 - 5526109 | 22701.5 |
| hypothetical protein | N824_08195 | Not Available | + | 5526147 - 5527103 | 36340.2 |
| hypothetical protein | N824_08200 | Not Available | + | 5527070 - 5527774 | 27352.6 |
| hypothetical protein | N824_08205 | Not Available | - | 5527786 - 5528193 | 16339.3 |
| hypothetical protein | N824_08210 | Not Available | + | 5528528 - 5529016 | 17484.4 |
| hypothetical protein | N824_08215 | Not Available | + | 5529321 - 5529887 | 20243.0 |
| hypothetical protein | N824_08220 | Not Available | + | 5529945 - 5530244 | 11585.0 |
| hypothetical protein | N824_08225 | Not Available | + | 5530249 - 5531280 | 38478.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.