Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_08130 | Not Available | + | 5516835 - 5517080 | 9362.93 |
| hypothetical protein | N824_08135 | Not Available | - | 5517077 - 5517865 | 30472.0 |
| hypothetical protein | N824_08140 | Not Available | - | 5517917 - 5518189 | 10572.1 |
| formamidopyrimidine-dna glycosylase | N824_08145 | Not Available | - | 5518204 - 5518983 | 29427.6 |
| hypothetical protein | N824_08150 | Not Available | - | 5518987 - 5519718 | 27346.8 |
| hypothetical protein | N824_08155 | Not Available | - | 5519708 - 5520034 | 12756.7 |
| hypothetical protein | N824_08160 | Not Available | - | 5520031 - 5520405 | 14663.5 |
| hypothetical protein | N824_08165 | Not Available | - | 5520407 - 5521633 | 47023.5 |
| dna polymerase v | N824_08170 | Not Available | - | 5521644 - 5522114 | 17888.3 |
| hypothetical protein | N824_08175 | Not Available | + | 5522304 - 5523689 | 52034.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.