Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_08080 | Not Available | + | 5510961 - 5511302 | 12296.1 |
| hypothetical protein | N824_08085 | Not Available | + | 5511347 - 5511994 | 23401.8 |
| hypothetical protein | N824_08090 | Not Available | + | 5512047 - 5513054 | 38752.1 |
| hypothetical protein | N824_08095 | Not Available | + | 5513108 - 5513290 | 6635.85 |
| hypothetical protein | N824_08100 | Not Available | + | 5513391 - 5514173 | 30682.2 |
| hypothetical protein | N824_08105 | Not Available | - | 5514356 - 5514832 | 17803.4 |
| hypothetical protein | N824_08110 | Not Available | + | 5514873 - 5515277 | 15085.7 |
| hypothetical protein | N824_08115 | Not Available | - | 5515292 - 5516239 | 36241.4 |
| hypothetical protein | N824_08120 | Not Available | - | 5516242 - 5516469 | 8422.91 |
| hypothetical protein | N824_08125 | Not Available | - | 5516505 - 5516714 | 8011.39 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.