Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein | N824_07920 | Not Available | + | 5482269 - 5482994 | 28074.3 |
| Trna-val | Not Available | Not Available | + | 5483109 - 5483186 | Not Available |
| Trna-val | Not Available | Not Available | + | 5483262 - 5483339 | Not Available |
| hypothetical protein | N824_07940 | Not Available | - | 5484941 - 5486389 | 56537.3 |
| hypothetical protein | N824_07945 | Not Available | - | 5486386 - 5486550 | 6260.7 |
| hypothetical protein | N824_07950 | Not Available | + | 5486642 - 5486872 | 8906.11 |
| hypothetical protein | N824_07955 | Not Available | + | 5486856 - 5487644 | 29852.0 |
| hypothetical protein | N824_07960 | Not Available | - | 5487725 - 5490076 | 91480.1 |
| hypothetical protein | N824_07965 | Not Available | - | 5490177 - 5490755 | 22275.6 |
| hypothetical protein | N824_07970 | Not Available | - | 5490755 - 5493310 | 95823.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.