Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_07870 | Not Available | - | 5472697 - 5474241 | 58224.0 |
| padr family transcriptional regulator | N824_07875 | Not Available | - | 5474241 - 5474606 | 13685.5 |
| hypothetical protein | N824_07880 | Not Available | + | 5474853 - 5475011 | 5990.65 |
| hypothetical protein | N824_07885 | Not Available | - | 5475013 - 5476155 | 41575.9 |
| tonb-denpendent receptor | N824_07890 | Not Available | - | 5476179 - 5478458 | 85580.9 |
| iron-dependent repressor | N824_07895 | Not Available | + | 5478580 - 5479248 | 25263.6 |
| hypothetical protein | N824_07900 | Not Available | + | 5479259 - 5480545 | 50039.9 |
| hypothetical protein | N824_07905 | Not Available | + | 5480555 - 5480863 | 11800.6 |
| hypothetical protein | N824_07910 | Not Available | - | 5480870 - 5481814 | 35479.2 |
| hypothetical protein | N824_07915 | Not Available | + | 5481918 - 5482265 | 12385.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.