Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_07770 | Not Available | - | 5450899 - 5451483 | 21923.2 |
| hypothetical protein | N824_07775 | Not Available | - | 5451480 - 5452052 | 21268.5 |
| hypothetical protein | N824_07780 | Not Available | + | 5452164 - 5452754 | 23123.7 |
| peptidyl-prolyl cis-trans isomerase | N824_07785 | Not Available | + | 5452819 - 5454183 | 52468.7 |
| atpase aaa | N824_07790 | Not Available | + | 5454189 - 5455151 | 35529.0 |
| glycerophosphoryl diester phosphodiesterase | N824_07795 | Not Available | - | 5455153 - 5456037 | 33502.0 |
| cysteinyl-trna synthetase | N824_07800 | Not Available | - | 5456142 - 5456999 | 31587.5 |
| cysteinyl-trna synthetase | N824_07805 | Not Available | - | 5457078 - 5458538 | 55167.7 |
| hypothetical protein | N824_07810 | Not Available | - | 5458557 - 5459669 | 42571.0 |
| transmembrane rhomboid family protein | N824_07815 | Not Available | - | 5459703 - 5460563 | 31758.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.