Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_07720 | Not Available | - | 5440515 - 5441021 | 19094.9 |
| hypothetical protein | N824_07725 | Not Available | - | 5441179 - 5441571 | 13858.9 |
| murein transglycosylase | N824_07730 | Not Available | - | 5441663 - 5442451 | 29600.9 |
| hypothetical protein | N824_07735 | Not Available | + | 5442779 - 5444248 | 55529.4 |
| hypothetical protein | N824_07740 | Not Available | + | 5444256 - 5445368 | 40282.6 |
| hypothetical protein | N824_07745 | Not Available | - | 5445442 - 5445615 | 6280.75 |
| n-acetyl-alpha-d-glucosaminyl l-malate synthase | N824_07750 | Not Available | - | 5445575 - 5446588 | 37007.4 |
| hypothetical protein | N824_07755 | Not Available | - | 5446686 - 5447168 | 18710.7 |
| hypothetical protein | N824_07760 | Not Available | - | 5447254 - 5448579 | 50612.4 |
| hypothetical protein | N824_07765 | Not Available | + | 5448663 - 5450927 | 83742.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.