Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_07620 | Not Available | - | 5422394 - 5423281 | 32209.9 |
| hypothetical protein | N824_07625 | Not Available | - | 5423336 - 5424001 | 23631.8 |
| hypothetical protein | N824_07630 | Not Available | - | 5423910 - 5424353 | 15557.7 |
| tatd family hydrolase | N824_07635 | Not Available | - | 5424356 - 5425123 | 28926.8 |
| peptidylprolyl isomerase | N824_07640 | Not Available | - | 5425230 - 5426231 | 35604.1 |
| exopolyphosphatase | N824_07645 | Not Available | - | 5426264 - 5427274 | 37733.0 |
| nucleoside diphosphate kinase | N824_07650 | Not Available | + | 5427473 - 5427892 | 15137.8 |
| hypothetical protein | N824_07655 | Not Available | + | 5427983 - 5428720 | 26502.2 |
| hypothetical protein | N824_07660 | Not Available | + | 5428777 - 5428941 | 5994.81 |
| hypothetical protein | N824_07665 | Not Available | - | 5428952 - 5429242 | 10926.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.