Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_07570 | Not Available | - | 5409816 - 5410154 | 13050.5 |
| hypothetical protein | N824_07575 | Not Available | - | 5410171 - 5411649 | 55852.8 |
| hypothetical protein | N824_07580 | Not Available | - | 5411682 - 5414987 | 121010.0 |
| fad-dependent oxidoreductase | N824_07585 | Not Available | - | 5415081 - 5416643 | 56911.2 |
| transcriptional regulator | N824_07590 | Not Available | + | 5416843 - 5417607 | 27635.5 |
| hypothetical protein | N824_07595 | Not Available | + | 5417675 - 5418316 | 24153.6 |
| hypothetical protein | N824_07600 | Not Available | - | 5418328 - 5419773 | 52382.9 |
| polyprenyl synthetase | N824_07605 | Not Available | - | 5419823 - 5420794 | 36447.2 |
| hypothetical protein | N824_07610 | Not Available | + | 5420866 - 5421861 | 36887.8 |
| hypothetical protein | N824_07615 | Not Available | - | 5421865 - 5422437 | 20325.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.