Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_07520 | Not Available | - | 5397099 - 5397764 | 24330.4 |
| hypothetical protein | N824_07525 | Not Available | - | 5397765 - 5399612 | 70649.7 |
| hypothetical protein | N824_07530 | Not Available | - | 5399706 - 5400713 | 35913.9 |
| membrane protein | N824_07535 | Not Available | - | 5400740 - 5402329 | 58419.6 |
| tonb-dependent receptor | N824_07540 | Not Available | - | 5402344 - 5405322 | 108657.0 |
| hypothetical protein | N824_07545 | Not Available | + | 5405357 - 5405470 | 4352.24 |
| laci family transcription regulator | N824_07550 | Not Available | - | 5405818 - 5406828 | 38137.9 |
| fatty acid desaturase | N824_07555 | Not Available | + | 5407005 - 5408153 | 43713.2 |
| hypothetical protein | N824_07560 | Not Available | - | 5408183 - 5408878 | 26701.3 |
| hypothetical protein | N824_07565 | Not Available | - | 5408890 - 5409750 | 32148.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.