Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidyl-trna hydrolase | N824_07470 | Not Available | - | 5386083 - 5386643 | 20677.2 |
| hypothetical protein | N824_07475 | Not Available | - | 5386753 - 5387031 | 10161.7 |
| hypothetical protein | N824_07480 | Not Available | - | 5387031 - 5387336 | 8386.11 |
| ribose-phosphate pyrophosphokinase | N824_07485 | Not Available | - | 5387397 - 5388338 | 34052.4 |
| Trna-gln | Not Available | Not Available | + | 5388407 - 5388480 | Not Available |
| multidrug transporter | N824_07495 | Not Available | + | 5388908 - 5391934 | 113383.0 |
| hypothetical protein | N824_07500 | Not Available | - | 5392203 - 5392400 | 7230.05 |
| hypothetical protein | N824_07505 | Not Available | - | 5392490 - 5393170 | 24521.9 |
| hypothetical protein | N824_07510 | Not Available | - | 5393270 - 5394619 | 49188.9 |
| hypothetical protein | N824_07515 | Not Available | - | 5394729 - 5397047 | 88754.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.