Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_07420 | Not Available | + | 5373701 - 5374342 | 23879.6 |
| hypothetical protein | N824_07425 | Not Available | - | 5374443 - 5376407 | 74138.6 |
| hypothetical protein | N824_07430 | Not Available | - | 5376483 - 5377220 | 27846.7 |
| hypothetical protein | N824_07435 | Not Available | - | 5377314 - 5377661 | 13176.8 |
| hypothetical protein | N824_07440 | Not Available | + | 5377809 - 5379311 | 57157.9 |
| regulator | N824_07445 | Not Available | + | 5379397 - 5380083 | 26010.7 |
| histidine kinase | N824_07450 | Not Available | + | 5380174 - 5383647 | 129466.0 |
| chemotaxis protein r | N824_07455 | Not Available | + | 5383649 - 5384473 | 32072.2 |
| hypothetical protein | N824_07460 | Not Available | + | 5384499 - 5385023 | 19352.6 |
| hypothetical protein | N824_07465 | Not Available | + | 5385050 - 5386093 | 38756.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.