Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l24 | N824_07320 | Not Available | - | 5361920 - 5362258 | 11928.9 |
| 50s ribosomal protein l14 | N824_07325 | Not Available | - | 5362260 - 5362628 | 13364.4 |
| 30s ribosomal protein s17 | N824_07330 | Not Available | - | 5362630 - 5362884 | 9784.19 |
| 50s ribosomal protein l29 | N824_07335 | Not Available | - | 5362898 - 5363107 | 7891.58 |
| 50s ribosomal protein l16 | N824_07340 | Not Available | - | 5363182 - 5363604 | 15948.9 |
| 30s ribosomal protein s3 | N824_07345 | Not Available | - | 5363643 - 5364491 | 30546.9 |
| 50s ribosomal protein l22 | N824_07350 | Not Available | - | 5364497 - 5364859 | 13745.9 |
| 30s ribosomal protein s19 | N824_07355 | Not Available | - | 5364867 - 5365133 | 10003.1 |
| 50s ribosomal protein l2 | N824_07360 | Not Available | - | 5365133 - 5365957 | 29826.2 |
| 50s ribosomal protein l23 | N824_07365 | Not Available | - | 5365981 - 5366271 | 10769.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.