Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methionine aminopeptidase | N824_07270 | Not Available | - | 5356225 - 5357010 | 28536.3 |
| preprotein translocase subunit secy | N824_07275 | Not Available | - | 5357022 - 5358356 | 48328.6 |
| 50s ribosomal protein l15 | N824_07280 | Not Available | - | 5358360 - 5358806 | 15564.8 |
| 50s ribosomal protein l30 | N824_07285 | Not Available | - | 5358918 - 5359097 | 6593.33 |
| 30s ribosomal protein s5 | N824_07290 | Not Available | - | 5359102 - 5359620 | 18024.1 |
| 50s ribosomal protein l18 | N824_07295 | Not Available | - | 5359639 - 5359992 | 12631.2 |
| 50s ribosomal protein l6 | N824_07300 | Not Available | - | 5359998 - 5360555 | 20163.5 |
| 30s ribosomal protein s8 | N824_07305 | Not Available | - | 5360574 - 5360972 | 14573.0 |
| 30s ribosomal protein s14 | N824_07310 | Not Available | - | 5361085 - 5361354 | 10018.4 |
| 50s ribosomal protein l5 | N824_07315 | Not Available | - | 5361354 - 5361920 | 21190.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.