Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_07120 | Not Available | - | 5325089 - 5325496 | 15485.8 |
| beta-galactosidase | N824_07125 | Not Available | - | 5325633 - 5326976 | 50587.2 |
| hypothetical protein | N824_07130 | Not Available | - | 5327013 - 5328854 | 69726.1 |
| 50s rrna methyltransferase | N824_07135 | Not Available | + | 5328919 - 5329392 | 18145.2 |
| hypothetical protein | N824_07140 | Not Available | + | 5329454 - 5329582 | 5024.27 |
| hypothetical protein | N824_07145 | Not Available | - | 5329651 - 5330190 | 19290.2 |
| peptidylprolyl isomerase | N824_07150 | Not Available | - | 5330192 - 5330629 | 15857.6 |
| hypothetical protein | N824_07155 | Not Available | + | 5330761 - 5332029 | 47698.6 |
| hypothetical protein | N824_07160 | Not Available | - | 5332067 - 5334082 | 77838.0 |
| purine nucleoside phosphorylase | N824_07165 | Not Available | - | 5334082 - 5334897 | 30025.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.