Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_07070 | Not Available | + | 5314298 - 5314474 | 6674.58 |
| hypothetical protein | N824_07075 | Not Available | + | 5314499 - 5314768 | 9403.89 |
| hypothetical protein | N824_07080 | Not Available | - | 5314813 - 5315154 | 12072.8 |
| glycerol-3-phosphate dehydrogenase | N824_07085 | Not Available | - | 5315201 - 5316199 | 37295.1 |
| transporter | N824_07090 | Not Available | - | 5316282 - 5317622 | 47960.4 |
| hypothetical protein | N824_07095 | Not Available | - | 5317692 - 5319062 | 50511.3 |
| hypothetical protein | N824_07100 | Not Available | + | 5319127 - 5319831 | 27274.2 |
| alpha-glucosidase | N824_07105 | Not Available | - | 5322477 - 5324441 | 74243.9 |
| hypothetical protein | N824_07110 | Not Available | + | 5324490 - 5324642 | 6129.69 |
| doxx family protein | N824_07115 | Not Available | + | 5324639 - 5325076 | 16188.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.