Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_06820 | Not Available | - | 5264475 - 5265065 | 22060.5 |
| arac family transcriptional regulator | N824_06825 | Not Available | + | 5265230 - 5266102 | 33217.6 |
| dna polymerase iii subunit gamma/tau | N824_06830 | Not Available | + | 5266190 - 5268010 | 67518.5 |
| hypothetical protein | N824_06835 | Not Available | - | 5268007 - 5268435 | 15949.6 |
| hypothetical protein | N824_06840 | Not Available | - | 5268611 - 5269843 | 43260.6 |
| hypothetical protein | N824_06845 | Not Available | - | 5269765 - 5270835 | 33956.8 |
| hypothetical protein | N824_06850 | Not Available | + | 5271028 - 5273100 | 77340.6 |
| hypothetical protein | N824_06855 | Not Available | + | 5273155 - 5273703 | 20208.8 |
| hpp family protein | N824_06860 | Not Available | - | 5273705 - 5274265 | 20447.8 |
| hypothetical protein | N824_06865 | Not Available | - | 5274387 - 5275037 | 23039.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.