Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| asparaginase | N824_06770 | Not Available | - | 5254690 - 5255715 | 36634.1 |
| membrane protein | N824_06775 | Not Available | - | 5255726 - 5257153 | 52550.9 |
| membrane protein | N824_06780 | Not Available | - | 5257140 - 5260427 | 121514.0 |
| hypothetical protein | N824_06785 | Not Available | - | 5260538 - 5261095 | 21165.0 |
| hypothetical protein | N824_06790 | Not Available | - | 5261121 - 5261621 | 18348.3 |
| hypothetical protein | N824_06795 | Not Available | - | 5261697 - 5262248 | 21725.4 |
| peptidoglycan transglycosylase | N824_06800 | Not Available | - | 5262292 - 5263020 | 28108.7 |
| 50s ribosomal protein l9 | N824_06805 | Not Available | - | 5263127 - 5263570 | 16160.7 |
| 30s ribosomal protein s18 | N824_06810 | Not Available | - | 5263581 - 5263844 | 10212.6 |
| 30s ribosomal protein s6 | N824_06815 | Not Available | - | 5263844 - 5264203 | 13612.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.