Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_06720 | Not Available | + | 5247906 - 5248154 | 8589.51 |
| hypothetical protein | N824_06725 | Not Available | + | 5248228 - 5248647 | 15594.9 |
| hypothetical protein | N824_06730 | Not Available | + | 5248858 - 5249103 | 9597.61 |
| hypothetical protein | N824_06735 | Not Available | + | 5249145 - 5249837 | 26673.0 |
| transmembrane (4fe-4s) cluster-binding oxidoreductase | N824_06740 | Not Available | + | 5249907 - 5251202 | 48504.2 |
| fe-s oxidoreductase | N824_06745 | Not Available | + | 5251234 - 5252034 | 29359.4 |
| metallo-beta-lactamase | N824_06750 | Not Available | + | 5252024 - 5252824 | 29791.4 |
| hypothetical protein | N824_06755 | Not Available | - | 5252787 - 5253224 | 17064.4 |
| abc transporter atpase | N824_06760 | Not Available | + | 5253321 - 5253800 | 18697.2 |
| hypothetical protein | N824_06765 | Not Available | - | 5253818 - 5254693 | 31919.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.