Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ferritin | N824_06670 | Not Available | - | 5236034 - 5236564 | 20809.5 |
| hypothetical protein | N824_06675 | Not Available | - | 5236666 - 5237031 | 14012.2 |
| hypothetical protein | N824_06680 | Not Available | - | 5237425 - 5238840 | 52417.6 |
| hypothetical protein | N824_06685 | Not Available | - | 5238852 - 5242100 | 118498.0 |
| hypothetical protein | N824_06690 | Not Available | - | 5242237 - 5244573 | 86523.5 |
| hypothetical protein | N824_06695 | Not Available | + | 5244904 - 5245806 | 34806.9 |
| Trna-phe | Not Available | Not Available | + | 5245931 - 5246006 | Not Available |
| hypothetical protein | N824_06705 | Not Available | + | 5246314 - 5246895 | 22980.0 |
| doxx family protein | N824_06710 | Not Available | + | 5246959 - 5247399 | 16520.5 |
| hypothetical protein | N824_06715 | Not Available | - | 5247452 - 5247817 | 14007.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.