Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phenylalanyl-trna synthetase subunit beta | N824_06570 | Not Available | - | 5219574 - 5219864 | 10914.3 |
| phenylalanyl-trna synthetase subunit beta | N824_06575 | Not Available | - | 5219918 - 5222317 | 88092.6 |
| hypothetical protein | N824_06580 | Not Available | - | 5222395 - 5222592 | 6744.07 |
| hypothetical protein | N824_06585 | Not Available | - | 5222595 - 5222987 | 15336.8 |
| hypothetical protein | N824_06590 | Not Available | - | 5222998 - 5224002 | 35357.3 |
| prolipoprotein diacylglyceryl transferase | N824_06595 | Not Available | - | 5223999 - 5224736 | 28448.9 |
| hypothetical protein | N824_06600 | Not Available | - | 5224743 - 5225081 | 12337.1 |
| hypothetical protein | N824_06605 | Not Available | - | 5225081 - 5225443 | 10038.3 |
| 30s ribosomal protein s20 | N824_06610 | Not Available | - | 5225516 - 5225770 | 9675.09 |
| hypothetical protein | N824_06615 | Not Available | + | 5225749 - 5225952 | 8199.02 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.