Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_06520 | Not Available | + | 5207943 - 5208518 | 22491.6 |
| hypothetical protein | N824_06525 | Not Available | + | 5208741 - 5209943 | 47049.3 |
| hypothetical protein | N824_06530 | Not Available | - | 5209947 - 5210453 | 18906.9 |
| hypothetical protein | N824_06535 | Not Available | - | 5210642 - 5211880 | 46450.0 |
| hypothetical protein | N824_06540 | Not Available | - | 5211852 - 5212175 | 12256.9 |
| hypothetical protein | N824_06545 | Not Available | - | 5212363 - 5213796 | 49573.6 |
| hypothetical protein | N824_06550 | Not Available | - | 5213910 - 5216705 | 104341.0 |
| hypothetical protein | N824_06555 | Not Available | - | 5216818 - 5217318 | 19200.1 |
| ribonuclease | N824_06560 | Not Available | - | 5217422 - 5218975 | 58169.5 |
| cell division protein zapa | N824_06565 | Not Available | - | 5219250 - 5219540 | 11160.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.